Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 HAUS4P1-201ENST00000406739 1145 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 AC246785.2-201ENST00000432512 513 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 KRT8P44-201ENST00000441609 1350 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CD99P1-205ENST00000527459 561 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PCDHA3-202ENST00000532566 4594 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 AC126365.1-201ENST00000578585 1514 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 SIGLEC16-201ENST00000599858 1437 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
MBD3L1Q8WWY6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AC092127.1-201ENST00000567093 3455 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 KRT17P2-201ENST00000300992 1314 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 MMP23A-201ENST00000234610 1017 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AL158047.1-201ENST00000445918 881 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 VENTXP5-201ENST00000523979 775 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 REXO1L3P-201ENST00000622202 1288 ntBASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
MBD3L1Q8WWY6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
MBD3L1Q8WWY6 AJ011931.1-201ENST00000618749 2492 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms