Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RTN4IP1Q8WWV3 AL365209.1-201ENST00000624418 6473 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 MIR4492-201ENST00000581627 80 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SLC25A6P4-201ENST00000586535 553 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 AL049840.3-201ENST00000602669 611 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 REXO1L3P-201ENST00000622202 1288 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 AC006058.4-201ENST00000624016 1670 ntBASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.71□□□□□ -0.21
RTN4IP1Q8WWV3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTN4IP1Q8WWV3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC129492.6-201ENST00000611383 1305 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 MRPL20P1-201ENST00000400819 433 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC009078.2-202ENST00000463353 338 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC108073.2-201ENST00000464002 357 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 RNA5SP419-201ENST00000515908 135 ntBASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTN4IP1Q8WWV3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms