Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 KRT8P13-201ENST00000463294 1010 ntBASIC19.4■□□□□ 0.7
SNED1Q8TER0 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.4■□□□□ 0.7
SNED1Q8TER0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
SNED1Q8TER0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNED1Q8TER0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.39■□□□□ 0.69
SNED1Q8TER0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.39■□□□□ 0.69
SNED1Q8TER0 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AC097359.3-201ENST00000603982 1210 ntBASIC19.39■□□□□ 0.69
SNED1Q8TER0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNED1Q8TER0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
SNED1Q8TER0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 AC026410.3-201ENST00000514280 936 ntBASIC19.38■□□□□ 0.69
SNED1Q8TER0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNED1Q8TER0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.38■□□□□ 0.69
SNED1Q8TER0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNED1Q8TER0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms