Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UBA3Q8TBC4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
UBA3Q8TBC4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
UBA3Q8TBC4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
UBA3Q8TBC4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 AC024909.3-201ENST00000611513 2257 ntBASIC17.14■□□□□ 0.33
UBA3Q8TBC4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 AC010491.1-201ENST00000563101 2797 ntBASIC17.14■□□□□ 0.33
UBA3Q8TBC4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 AC069262.1-201ENST00000539058 672 ntBASIC17.14■□□□□ 0.33
UBA3Q8TBC4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 Z92544.3-201ENST00000624747 417 ntBASIC17.14■□□□□ 0.33
UBA3Q8TBC4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
UBA3Q8TBC4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 AL512356.2-201ENST00000546955 174 ntBASIC17.13■□□□□ 0.33
UBA3Q8TBC4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBA3Q8TBC4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBA3Q8TBC4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms