Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AC008741.2-201ENST00000612792 3115 ntBASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AC026150.2-201ENST00000564693 1156 ntBASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 AP001059.3-201ENST00000619053 235 ntBASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 HLA-J-203ENST00000494367 1087 ntBASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 LINC00628-201ENST00000628516 1289 ntBASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CCDC148Q8NFR7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 SPDYE7P-202ENST00000420373 878 ntBASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AL353705.2-201ENST00000428243 662 ntBASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AL512356.2-201ENST00000546955 174 ntBASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 AC018529.1-201ENST00000613063 361 ntBASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 PCDHA1-201ENST00000378133 2726 ntBASIC18.66■□□□□ 0.58
CCDC148Q8NFR7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms