Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
VPS37AQ8NEZ2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.52■□□□□ 0.08
VPS37AQ8NEZ2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS37AQ8NEZ2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 HYMAI-201ENST00000635591 3347 ntBASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
VPS37AQ8NEZ2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 KRT18P34-201ENST00000488218 1270 ntBASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 AC148477.8-201ENST00000624298 468 ntBASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 PRAL-201ENST00000624952 3286 ntBASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 AC097376.2-205ENST00000610159 5334 ntBASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
VPS37AQ8NEZ2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VPS37AQ8NEZ2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms