Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 TFAMP1-201ENST00000412727 736 ntBASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AC093724.1-201ENST00000448659 1027 ntBASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 FOXO1B-201ENST00000504678 1527 ntBASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
SIMC1Q8NDZ2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 HMGN1P19-201ENST00000436976 333 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AC005829.1-201ENST00000570002 483 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 MIR4469-201ENST00000583919 79 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 AC092384.3-202ENST00000564646 2873 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 FAM45BP-202ENST00000592932 1624 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 ELL2P1-201ENST00000413990 1906 ntBASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.31■□□□□ 0.04
SIMC1Q8NDZ2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 CEND1P1-201ENST00000451006 455 ntBASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.3■□□□□ 0.04
SIMC1Q8NDZ2 POU5F1P6-201ENST00000466990 990 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms