Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 RPL37AP1-201ENST00000412502 279 ntBASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 AL080243.2-201ENST00000418783 582 ntBASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 IGHV3-42-201ENST00000520410 361 ntBASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 KRT8P12-202ENST00000472924 1397 ntBASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAM1L1Q8N609 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.96■□□□□ 0.14
TRAM1L1Q8N609 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 EEF1DP4-201ENST00000446006 880 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 AL390955.2-201ENST00000603032 514 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 TEX28P1-201ENST00000613479 1221 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 TEX28P2-201ENST00000617764 1221 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 AL513523.2-202ENST00000427283 2040 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 BNIP3P1-202ENST00000550043 1585 ntBASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAM1L1Q8N609 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 KRT8P37-201ENST00000451609 1420 ntBASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AC069224.1-201ENST00000566372 1715 ntBASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 AC005498.2-205ENST00000593218 784 ntBASIC15.94■□□□□ 0.14
TRAM1L1Q8N609 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms