Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 MIR648-201ENST00000385046 94 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AC093520.2-201ENST00000561830 333 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 AP001059.3-201ENST00000619053 235 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 LINC00628-201ENST00000628516 1289 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 FAM58DP-201ENST00000428076 619 ntBASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 AC018529.1-201ENST00000613063 361 ntBASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB42Q8N4Z0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 FOXO1B-201ENST00000504678 1527 ntBASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RAB42Q8N4Z0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 AC006449.5-201ENST00000610658 2098 ntBASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RAB42Q8N4Z0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms