Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC010491.1-201ENST00000563101 2797 ntBASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCUBE3Q8IX30 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 AC024909.3-201ENST00000611513 2257 ntBASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 AC069262.1-201ENST00000539058 672 ntBASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 AC025678.2-201ENST00000562061 970 ntBASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCUBE3Q8IX30 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 MIR6080-201ENST00000617359 66 ntBASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 Z92544.3-201ENST00000624747 417 ntBASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCUBE3Q8IX30 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCUBE3Q8IX30 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCUBE3Q8IX30 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.02■□□□□ 0.31
SCUBE3Q8IX30 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SCUBE3Q8IX30 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.02■□□□□ 0.31
SCUBE3Q8IX30 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 AL603832.2-201ENST00000566195 2125 ntBASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCUBE3Q8IX30 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms