Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SLC25A6P2-201ENST00000497974 877 ntBASIC10.82□□□□□ -0.68
SCXQ7RTU7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AC106028.4-201ENST00000614509 607 ntBASIC10.82□□□□□ -0.68
SCXQ7RTU7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AC092902.6-201ENST00000641783 218 ntBASIC10.82□□□□□ -0.68
SCXQ7RTU7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AC092919.2-201ENST00000623631 1645 ntBASIC10.82□□□□□ -0.68
SCXQ7RTU7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 LINC00304-203ENST00000565008 1864 ntBASIC10.82□□□□□ -0.68
SCXQ7RTU7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
SCXQ7RTU7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SCXQ7RTU7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 STOM-202ENST00000347359 870 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TSEN15P1-201ENST00000423257 515 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AC112191.1-201ENST00000523689 701 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AC004835.2-201ENST00000603762 682 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AL662844.4-201ENST00000606367 2838 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 AC129492.6-201ENST00000611383 1305 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 LYSMD4-203ENST00000378904 2122 ntBASIC10.81□□□□□ -0.68
SCXQ7RTU7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SCXQ7RTU7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC10.81□□□□□ -0.68
SCXQ7RTU7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 LINC02228-204ENST00000642115 2962 ntBASIC10.8□□□□□ -0.68
SCXQ7RTU7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SCXQ7RTU7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SCXQ7RTU7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms