Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 MIR648-201ENST00000385046 94 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.23■□□□□ 0.19
USP45Q70EL2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.23■□□□□ 0.19
USP45Q70EL2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 MTND6P24-201ENST00000440466 518 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.23■□□□□ 0.19
USP45Q70EL2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
USP45Q70EL2 CYMP-203ENST00000474680 1263 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
USP45Q70EL2 AC069120.2-201ENST00000524091 540 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
USP45Q70EL2 AC093512.1-201ENST00000617969 520 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 AL596087.1-201ENST00000400979 1969 ntBASIC16.23■□□□□ 0.19
USP45Q70EL2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.23■□□□□ 0.19
USP45Q70EL2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
USP45Q70EL2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.23■□□□□ 0.19
USP45Q70EL2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
USP45Q70EL2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.23■□□□□ 0.19
USP45Q70EL2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
USP45Q70EL2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.23■□□□□ 0.19
USP45Q70EL2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.23■□□□□ 0.19
USP45Q70EL2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
USP45Q70EL2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP45Q70EL2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.22■□□□□ 0.19
USP45Q70EL2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP45Q70EL2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.22■□□□□ 0.19
USP45Q70EL2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP45Q70EL2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.22■□□□□ 0.19
USP45Q70EL2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.22■□□□□ 0.19
USP45Q70EL2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.22■□□□□ 0.19
USP45Q70EL2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 AC027796.2-201ENST00000575326 344 ntBASIC16.22■□□□□ 0.19
USP45Q70EL2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.22■□□□□ 0.19
USP45Q70EL2 RN7SL828P-201ENST00000607615 303 ntBASIC16.22■□□□□ 0.19
USP45Q70EL2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.22■□□□□ 0.19
USP45Q70EL2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.22■□□□□ 0.19
USP45Q70EL2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
USP45Q70EL2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.22■□□□□ 0.19
USP45Q70EL2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.22■□□□□ 0.19
USP45Q70EL2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
USP45Q70EL2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
USP45Q70EL2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.22■□□□□ 0.19
USP45Q70EL2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.22■□□□□ 0.19
USP45Q70EL2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.21■□□□□ 0.19
USP45Q70EL2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.21■□□□□ 0.19
USP45Q70EL2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.21■□□□□ 0.19
USP45Q70EL2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.21■□□□□ 0.19
USP45Q70EL2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
USP45Q70EL2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.21■□□□□ 0.19
USP45Q70EL2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.21■□□□□ 0.19
USP45Q70EL2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
USP45Q70EL2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
USP45Q70EL2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.21■□□□□ 0.19
USP45Q70EL2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
USP45Q70EL2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.21■□□□□ 0.19
USP45Q70EL2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.21■□□□□ 0.19
USP45Q70EL2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
USP45Q70EL2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.21■□□□□ 0.19
USP45Q70EL2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.21■□□□□ 0.19
USP45Q70EL2 AC243562.2-201ENST00000561247 970 ntBASIC16.21■□□□□ 0.19
USP45Q70EL2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms