Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00299Q6ZSB3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AL023775.1-201ENST00000454907 1746 ntBASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AC023024.2-201ENST00000623561 1993 ntBASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 SIGLEC30P-201ENST00000455569 941 ntBASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AC152010.1-201ENST00000415779 2006 ntBASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00299Q6ZSB3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MMP23A-201ENST00000234610 1017 ntBASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC079602.3-201ENST00000623931 403 ntBASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00299Q6ZSB3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms