Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 ANKRD19P-201ENST00000338192 862 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 RARRES2P5-201ENST00000564013 466 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 AC026790.2-201ENST00000606282 430 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 AC074044.1-201ENST00000609673 707 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 AL022328.1-201ENST00000610050 478 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 AC244093.1-201ENST00000610837 814 ntBASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SHISA2Q6UWI4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AL162726.2-201ENST00000438986 1017 ntBASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 OR13I1P-201ENST00000609811 1264 ntBASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TUBB8P12-201ENST00000308911 1335 ntBASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TUBB7P-202ENST00000428444 1305 ntBASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 TUBB8P7-204ENST00000567960 1332 ntBASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SHISA2Q6UWI4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SHISA2Q6UWI4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms