Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 SSR4P1-203ENST00000599569 2260 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 LAGE3P1-201ENST00000425356 484 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 HMGN1P19-201ENST00000436976 333 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 AC002347.1-201ENST00000569543 541 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 AC027796.2-201ENST00000575326 344 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 AL355385.1-201ENST00000606123 409 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 AC005593.1-201ENST00000624894 515 ntBASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXR1Q6PIV2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 AL596442.2-201ENST00000610240 980 ntBASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXR1Q6PIV2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 AC009947.1-201ENST00000444350 727 ntBASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXR1Q6PIV2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms