Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AL122018.1-201ENST00000446607 2310 ntBASIC12.3□□□□□ -0.44
MRPL54Q6P161 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AP003071.4-201ENST00000562276 1284 ntBASIC12.3□□□□□ -0.44
MRPL54Q6P161 AP001412.1-201ENST00000608405 714 ntBASIC12.3□□□□□ -0.44
MRPL54Q6P161 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AL359736.2-201ENST00000621992 437 ntBASIC12.3□□□□□ -0.44
MRPL54Q6P161 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MRPL54Q6P161 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MRPL54Q6P161 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 LINC01144-201ENST00000626198 1710 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 SNX33P1-201ENST00000592116 1762 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MRPL54Q6P161 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 RASA4DP-201ENST00000460726 1199 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 AC128688.1-201ENST00000487626 519 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.29□□□□□ -0.44
MRPL54Q6P161 FITM1-202ENST00000559294 800 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 GCSHP2-201ENST00000560971 527 ntBASIC12.29□□□□□ -0.44
MRPL54Q6P161 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms