Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AC004987.2-201ENST00000395959 1148 ntBASIC17.1■□□□□ 0.33
VARS2Q5ST30 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AC087499.6-201ENST00000411576 835 ntBASIC17.1■□□□□ 0.33
VARS2Q5ST30 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AL589987.1-201ENST00000453380 819 ntBASIC17.1■□□□□ 0.33
VARS2Q5ST30 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 CHCHD2P3-201ENST00000603038 451 ntBASIC17.1■□□□□ 0.33
VARS2Q5ST30 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.1■□□□□ 0.33
VARS2Q5ST30 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VARS2Q5ST30 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TPRX2P-201ENST00000535362 881 ntBASIC17.09■□□□□ 0.33
VARS2Q5ST30 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 AC074044.1-201ENST00000609673 707 ntBASIC17.09■□□□□ 0.33
VARS2Q5ST30 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 SLC7A15P-201ENST00000424028 1363 ntBASIC17.09■□□□□ 0.33
VARS2Q5ST30 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TNRC18P3-201ENST00000441896 2691 ntBASIC17.09■□□□□ 0.33
VARS2Q5ST30 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
VARS2Q5ST30 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VARS2Q5ST30 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.08■□□□□ 0.33
VARS2Q5ST30 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 AC124067.4-201ENST00000519691 2379 ntBASIC17.08■□□□□ 0.33
VARS2Q5ST30 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.08■□□□□ 0.33
VARS2Q5ST30 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.33
VARS2Q5ST30 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.08■□□□□ 0.33
VARS2Q5ST30 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
VARS2Q5ST30 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.08■□□□□ 0.33
VARS2Q5ST30 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 CU639417.3-201ENST00000624240 1404 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms