Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 BASP1P1-201ENST00000430708 665 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SPDYE11-202ENST00000450699 704 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC243562.1-201ENST00000560672 389 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SPDYE9P-201ENST00000570642 692 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 AC026120.1-201ENST00000611536 926 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SPDYE10P-202ENST00000612005 668 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SPDYE8P-202ENST00000612377 668 ntBASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HERC4Q5GLZ8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 TSPY16P-201ENST00000449843 468 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 KRT8P48-201ENST00000515599 1220 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AC027307.2-201ENST00000591252 911 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AL359881.2-201ENST00000602973 570 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AL589702.1-201ENST00000641229 1509 ntBASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HERC4Q5GLZ8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 AC055876.3-201ENST00000431496 288 ntBASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 TIMM8BP1-201ENST00000452384 211 ntBASIC18.11■□□□□ 0.49
HERC4Q5GLZ8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms