Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 AL139288.1-201ENST00000623748 933 ntBASIC14.58□□□□□ -0.08
CCDC58Q4VC31 PGM5P2-202ENST00000637225 1043 ntBASIC14.58□□□□□ -0.08
CCDC58Q4VC31 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC58Q4VC31 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 RN7SL850P-201ENST00000579959 291 ntBASIC14.57□□□□□ -0.08
CCDC58Q4VC31 AL591684.3-201ENST00000605187 298 ntBASIC14.57□□□□□ -0.08
CCDC58Q4VC31 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.57□□□□□ -0.08
CCDC58Q4VC31 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC58Q4VC31 AC106795.1-205ENST00000512851 1056 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms