Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC026396.1-201ENST00000419388 421 ntBASIC14.53□□□□□ -0.08
SCN1BQ07699 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.53□□□□□ -0.08
SCN1BQ07699 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.53□□□□□ -0.08
SCN1BQ07699 AL445228.2-201ENST00000605589 952 ntBASIC14.53□□□□□ -0.08
SCN1BQ07699 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.53□□□□□ -0.08
SCN1BQ07699 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.53□□□□□ -0.08
SCN1BQ07699 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SCN1BQ07699 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SCN1BQ07699 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.52□□□□□ -0.08
SCN1BQ07699 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 GGT3P-204ENST00000453783 1664 ntBASIC14.52□□□□□ -0.08
SCN1BQ07699 AC016027.1-202ENST00000607927 1699 ntBASIC14.52□□□□□ -0.08
SCN1BQ07699 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.52□□□□□ -0.08
SCN1BQ07699 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SCN1BQ07699 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.52□□□□□ -0.08
SCN1BQ07699 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SCN1BQ07699 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.52□□□□□ -0.08
SCN1BQ07699 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 POM121L3P-201ENST00000419331 1163 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 SIGLEC30P-201ENST00000455569 941 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 AC012615.1-201ENST00000565797 1299 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 MIR3180-1-201ENST00000580374 94 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 MIR3180-3-201ENST00000584616 94 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 AC138894.3-201ENST00000603787 634 ntBASIC14.52□□□□□ -0.09
SCN1BQ07699 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SCN1BQ07699 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.52□□□□□ -0.09
SCN1BQ07699 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.52□□□□□ -0.09
SCN1BQ07699 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SCN1BQ07699 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SCN1BQ07699 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SCN1BQ07699 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SCN1BQ07699 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SCN1BQ07699 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 AC136621.1-201ENST00000624017 2304 ntBASIC14.51□□□□□ -0.09
SCN1BQ07699 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SCN1BQ07699 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SCN1BQ07699 MIR1224-201ENST00000408193 85 ntBASIC14.51□□□□□ -0.09
SCN1BQ07699 AL020989.1-201ENST00000422979 469 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms