Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
HMGCS1Q01581 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 AL022342.1-201ENST00000400363 863 ntBASIC15.65■□□□□ 0.1
HMGCS1Q01581 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.65■□□□□ 0.1
HMGCS1Q01581 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 AL596257.1-201ENST00000641463 2694 ntBASIC15.65■□□□□ 0.1
HMGCS1Q01581 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 DBET-201ENST00000630918 3363 ntBASIC15.65■□□□□ 0.1
HMGCS1Q01581 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCS1Q01581 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCS1Q01581 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.64■□□□□ 0.1
HMGCS1Q01581 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 AC144831.1-201ENST00000573312 2656 ntBASIC15.64■□□□□ 0.09
HMGCS1Q01581 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 AC106730.1-201ENST00000566722 1090 ntBASIC15.64■□□□□ 0.09
HMGCS1Q01581 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HMGCS1Q01581 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCS1Q01581 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 ZNF259P1-201ENST00000407656 1365 ntBASIC15.63■□□□□ 0.09
HMGCS1Q01581 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 AP002414.2-201ENST00000591780 3365 ntBASIC15.63■□□□□ 0.09
HMGCS1Q01581 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 AL513190.1-201ENST00000621254 727 ntBASIC15.63■□□□□ 0.09
HMGCS1Q01581 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCS1Q01581 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
HMGCS1Q01581 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms