Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 SLC7A15P-201ENST00000424028 1363 ntBASIC18.87■□□□□ 0.61
IRX3P78415 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IRX3P78415 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.87■□□□□ 0.61
IRX3P78415 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
IRX3P78415 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 SDHAP3-202ENST00000515467 728 ntBASIC18.87■□□□□ 0.61
IRX3P78415 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.87■□□□□ 0.61
IRX3P78415 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 AL023806.1-201ENST00000603994 1649 ntBASIC18.87■□□□□ 0.61
IRX3P78415 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
IRX3P78415 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX3P78415 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IRX3P78415 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX3P78415 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
IRX3P78415 AC022211.2-201ENST00000585075 2527 ntBASIC18.87■□□□□ 0.61
IRX3P78415 AC005052.1-201ENST00000625181 2492 ntBASIC18.86■□□□□ 0.61
IRX3P78415 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX3P78415 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX3P78415 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
IRX3P78415 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IRX3P78415 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
IRX3P78415 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
IRX3P78415 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.86■□□□□ 0.61
IRX3P78415 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 TPRX2P-201ENST00000535362 881 ntBASIC18.86■□□□□ 0.61
IRX3P78415 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 SRD5A3P1-201ENST00000603021 949 ntBASIC18.86■□□□□ 0.61
IRX3P78415 AC017083.2-201ENST00000608069 979 ntBASIC18.86■□□□□ 0.61
IRX3P78415 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
IRX3P78415 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.86■□□□□ 0.61
IRX3P78415 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IRX3P78415 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.85■□□□□ 0.61
IRX3P78415 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 SPDYE17-201ENST00000412399 783 ntBASIC18.85■□□□□ 0.61
IRX3P78415 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.85■□□□□ 0.61
IRX3P78415 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.85■□□□□ 0.61
IRX3P78415 MIR6069-201ENST00000620069 79 ntBASIC18.85■□□□□ 0.61
IRX3P78415 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 GPAA1P2-202ENST00000606848 1787 ntBASIC18.85■□□□□ 0.61
IRX3P78415 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
IRX3P78415 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
IRX3P78415 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
IRX3P78415 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
IRX3P78415 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.84■□□□□ 0.61
IRX3P78415 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 HYMAI-201ENST00000635591 3347 ntBASIC18.84■□□□□ 0.61
IRX3P78415 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
IRX3P78415 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms