Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP1P78357 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CNTNAP1P78357 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP1P78357 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNTNAP1P78357 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.03■□□□□ 0.64
CNTNAP1P78357 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 UBALD1-205ENST00000590891 2641 ntBASIC19.02■□□□□ 0.64
CNTNAP1P78357 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AC004987.2-201ENST00000395959 1148 ntBASIC19.02■□□□□ 0.64
CNTNAP1P78357 AC007969.1-201ENST00000433675 447 ntBASIC19.02■□□□□ 0.64
CNTNAP1P78357 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AC244669.2-201ENST00000612320 853 ntBASIC19.02■□□□□ 0.64
CNTNAP1P78357 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.02■□□□□ 0.64
CNTNAP1P78357 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNTNAP1P78357 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.02■□□□□ 0.63
CNTNAP1P78357 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNTNAP1P78357 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CNTNAP1P78357 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
CNTNAP1P78357 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AL592424.1-201ENST00000563624 1536 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AL355334.1-201ENST00000417713 215 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 FNTAP2-201ENST00000430308 634 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 HIST2H2BC-201ENST00000498492 580 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AL359711.2-201ENST00000563105 872 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 MIR3619-201ENST00000579667 83 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 AC138627.1-207ENST00000641560 1006 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.01■□□□□ 0.63
CNTNAP1P78357 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 PCDHB18P-201ENST00000524813 2368 ntBASIC19.01■□□□□ 0.63
CNTNAP1P78357 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNTNAP1P78357 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP1P78357 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CNTNAP1P78357 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CNTNAP1P78357 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP1P78357 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19■□□□□ 0.63
CNTNAP1P78357 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19■□□□□ 0.63
CNTNAP1P78357 AC004898.1-201ENST00000451057 766 ntBASIC19■□□□□ 0.63
CNTNAP1P78357 Z93015.1-201ENST00000451718 390 ntBASIC19■□□□□ 0.63
CNTNAP1P78357 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms