Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RHBDL3P58872 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RHBDL3P58872 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RHBDL3P58872 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RHBDL3P58872 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RHBDL3P58872 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RHBDL3P58872 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RHBDL3P58872 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RHBDL3P58872 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.94■□□□□ 0.62
RHBDL3P58872 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.94■□□□□ 0.62
RHBDL3P58872 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 AC104596.2-201ENST00000512793 793 ntBASIC18.94■□□□□ 0.62
RHBDL3P58872 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AC036164.1-201ENST00000570544 333 ntBASIC18.94■□□□□ 0.62
RHBDL3P58872 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RHBDL3P58872 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.94■□□□□ 0.62
RHBDL3P58872 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.94■□□□□ 0.62
RHBDL3P58872 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RHBDL3P58872 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDL3P58872 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDL3P58872 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 AC018892.3-201ENST00000623986 2499 ntBASIC18.93■□□□□ 0.62
RHBDL3P58872 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.93■□□□□ 0.62
RHBDL3P58872 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDL3P58872 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.93■□□□□ 0.62
RHBDL3P58872 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.93■□□□□ 0.62
RHBDL3P58872 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.93■□□□□ 0.62
RHBDL3P58872 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDL3P58872 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.93■□□□□ 0.62
RHBDL3P58872 BRI3BPP1-201ENST00000594224 787 ntBASIC18.93■□□□□ 0.62
RHBDL3P58872 AC008735.3-201ENST00000596646 500 ntBASIC18.93■□□□□ 0.62
RHBDL3P58872 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.93■□□□□ 0.62
RHBDL3P58872 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RHBDL3P58872 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 AL607033.1-201ENST00000623900 1599 ntBASIC18.93■□□□□ 0.62
RHBDL3P58872 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RHBDL3P58872 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.92■□□□□ 0.62
RHBDL3P58872 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.92■□□□□ 0.62
RHBDL3P58872 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
RHBDL3P58872 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDL3P58872 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.92■□□□□ 0.62
RHBDL3P58872 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDL3P58872 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDL3P58872 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDL3P58872 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RHBDL3P58872 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.92■□□□□ 0.62
RHBDL3P58872 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RHBDL3P58872 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.92■□□□□ 0.62
RHBDL3P58872 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RHBDL3P58872 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.92■□□□□ 0.62
RHBDL3P58872 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms