Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MEIS3P1-201ENST00000495167 958 ntBASIC16.84■□□□□ 0.29
EPHB3P54753 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
EPHB3P54753 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
EPHB3P54753 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 KRT8P37-201ENST00000451609 1420 ntBASIC16.84■□□□□ 0.29
EPHB3P54753 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
EPHB3P54753 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHB3P54753 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHB3P54753 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHB3P54753 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
EPHB3P54753 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHB3P54753 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHB3P54753 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
EPHB3P54753 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
EPHB3P54753 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.83■□□□□ 0.29
EPHB3P54753 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
EPHB3P54753 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
EPHB3P54753 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 AC123567.1-201ENST00000548294 1261 ntBASIC16.83■□□□□ 0.28
EPHB3P54753 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 WASH4P-201ENST00000564273 1246 ntBASIC16.83■□□□□ 0.28
EPHB3P54753 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.83■□□□□ 0.28
EPHB3P54753 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EPHB3P54753 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
EPHB3P54753 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHB3P54753 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHB3P54753 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 AL512384.1-201ENST00000406683 331 ntBASIC16.82■□□□□ 0.28
EPHB3P54753 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
EPHB3P54753 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHB3P54753 GIMAP3P-201ENST00000495150 836 ntBASIC16.82■□□□□ 0.28
EPHB3P54753 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.82■□□□□ 0.28
EPHB3P54753 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.82■□□□□ 0.28
EPHB3P54753 RRP7BP-205ENST00000566851 833 ntBASIC16.82■□□□□ 0.28
EPHB3P54753 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
EPHB3P54753 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EPHB3P54753 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHB3P54753 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.82■□□□□ 0.28
EPHB3P54753 AC093726.1-201ENST00000608064 963 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms