Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.66■□□□□ 0.42
CASP4P49662 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.66■□□□□ 0.42
CASP4P49662 AC004835.2-201ENST00000603762 682 ntBASIC17.66■□□□□ 0.42
CASP4P49662 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.66■□□□□ 0.42
CASP4P49662 AC139530.3-201ENST00000620344 690 ntBASIC17.66■□□□□ 0.42
CASP4P49662 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.66■□□□□ 0.42
CASP4P49662 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.66■□□□□ 0.42
CASP4P49662 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.66■□□□□ 0.42
CASP4P49662 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.66■□□□□ 0.42
CASP4P49662 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CASP4P49662 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.66■□□□□ 0.42
CASP4P49662 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CASP4P49662 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CASP4P49662 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.66■□□□□ 0.42
CASP4P49662 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CASP4P49662 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.66■□□□□ 0.42
CASP4P49662 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CASP4P49662 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CASP4P49662 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CASP4P49662 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CASP4P49662 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 AP005117.1-202ENST00000581724 1908 ntBASIC17.65■□□□□ 0.42
CASP4P49662 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.65■□□□□ 0.42
CASP4P49662 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 AC254562.1-201ENST00000417586 456 ntBASIC17.65■□□□□ 0.42
CASP4P49662 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.65■□□□□ 0.42
CASP4P49662 KRT18P32-201ENST00000424695 1287 ntBASIC17.65■□□□□ 0.42
CASP4P49662 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.65■□□□□ 0.42
CASP4P49662 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.65■□□□□ 0.42
CASP4P49662 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.65■□□□□ 0.42
CASP4P49662 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CASP4P49662 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.65■□□□□ 0.42
CASP4P49662 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.65■□□□□ 0.42
CASP4P49662 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.65■□□□□ 0.42
CASP4P49662 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CASP4P49662 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.65■□□□□ 0.42
CASP4P49662 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CASP4P49662 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.64■□□□□ 0.42
CASP4P49662 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
CASP4P49662 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CASP4P49662 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.64■□□□□ 0.42
CASP4P49662 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.64■□□□□ 0.42
CASP4P49662 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.64■□□□□ 0.42
CASP4P49662 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 HLA-H-201ENST00000383620 1096 ntBASIC17.64■□□□□ 0.41
CASP4P49662 AC024267.1-201ENST00000582320 895 ntBASIC17.64■□□□□ 0.41
CASP4P49662 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.64■□□□□ 0.41
CASP4P49662 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CASP4P49662 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CASP4P49662 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CASP4P49662 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CASP4P49662 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CASP4P49662 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.63■□□□□ 0.41
CASP4P49662 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CASP4P49662 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CASP4P49662 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.63■□□□□ 0.41
CASP4P49662 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms