Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPFP49454 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.94■□□□□ 0.46
CENPFP49454 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.94■□□□□ 0.46
CENPFP49454 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.94■□□□□ 0.46
CENPFP49454 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CENPFP49454 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CENPFP49454 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CENPFP49454 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.93■□□□□ 0.46
CENPFP49454 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.93■□□□□ 0.46
CENPFP49454 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.93■□□□□ 0.46
CENPFP49454 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.93■□□□□ 0.46
CENPFP49454 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.93■□□□□ 0.46
CENPFP49454 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CENPFP49454 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CENPFP49454 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.93■□□□□ 0.46
CENPFP49454 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CENPFP49454 AC120045.2-201ENST00000567334 178 ntBASIC17.93■□□□□ 0.46
CENPFP49454 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 LINC02012-201ENST00000608206 1725 ntBASIC17.93■□□□□ 0.46
CENPFP49454 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CENPFP49454 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CENPFP49454 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.93■□□□□ 0.46
CENPFP49454 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CENPFP49454 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CENPFP49454 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.92■□□□□ 0.46
CENPFP49454 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 AC134312.5-201ENST00000568031 1313 ntBASIC17.92■□□□□ 0.46
CENPFP49454 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CENPFP49454 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CENPFP49454 AC134698.3-201ENST00000523880 214 ntBASIC17.92■□□□□ 0.46
CENPFP49454 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.92■□□□□ 0.46
CENPFP49454 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.92■□□□□ 0.46
CENPFP49454 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CENPFP49454 MIR4321-201ENST00000592276 80 ntBASIC17.92■□□□□ 0.46
CENPFP49454 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CENPFP49454 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CENPFP49454 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.92■□□□□ 0.46
CENPFP49454 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.91■□□□□ 0.46
CENPFP49454 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPFP49454 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CENPFP49454 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.91■□□□□ 0.46
CENPFP49454 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CENPFP49454 AC016700.1-201ENST00000429424 312 ntBASIC17.91■□□□□ 0.46
CENPFP49454 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.91■□□□□ 0.46
CENPFP49454 AC018635.2-201ENST00000608625 364 ntBASIC17.91■□□□□ 0.46
CENPFP49454 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CENPFP49454 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPFP49454 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CENPFP49454 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms