Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 AL355385.1-201ENST00000606123 409 ntBASIC19■□□□□ 0.63
NEDD4P46934 AL390754.1-201ENST00000619088 582 ntBASIC19■□□□□ 0.63
NEDD4P46934 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19■□□□□ 0.63
NEDD4P46934 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19■□□□□ 0.63
NEDD4P46934 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 AP001282.1-201ENST00000531301 1499 ntBASIC19■□□□□ 0.63
NEDD4P46934 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19■□□□□ 0.63
NEDD4P46934 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
NEDD4P46934 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19■□□□□ 0.63
NEDD4P46934 SPDYE17-201ENST00000412399 783 ntBASIC19■□□□□ 0.63
NEDD4P46934 AC055876.3-201ENST00000431496 288 ntBASIC19■□□□□ 0.63
NEDD4P46934 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19■□□□□ 0.63
NEDD4P46934 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 AC243562.2-201ENST00000561247 970 ntBASIC19■□□□□ 0.63
NEDD4P46934 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
NEDD4P46934 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 AC138649.4-201ENST00000612222 287 ntBASIC19■□□□□ 0.63
NEDD4P46934 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19■□□□□ 0.63
NEDD4P46934 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEDD4P46934 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NEDD4P46934 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.99■□□□□ 0.63
NEDD4P46934 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
NEDD4P46934 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NEDD4P46934 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.99■□□□□ 0.63
NEDD4P46934 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.99■□□□□ 0.63
NEDD4P46934 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NEDD4P46934 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEDD4P46934 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 EEF1DP4-201ENST00000446006 880 ntBASIC18.99■□□□□ 0.63
NEDD4P46934 IGHV3-42-201ENST00000520410 361 ntBASIC18.99■□□□□ 0.63
NEDD4P46934 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.99■□□□□ 0.63
NEDD4P46934 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.99■□□□□ 0.63
NEDD4P46934 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 AC100757.3-201ENST00000622361 1406 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEDD4P46934 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 AL365203.3-201ENST00000609742 2057 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 AC112504.1-201ENST00000623415 1841 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
NEDD4P46934 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NEDD4P46934 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NEDD4P46934 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.98■□□□□ 0.63
NEDD4P46934 TSSK5P-201ENST00000423978 907 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.98■□□□□ 0.63
NEDD4P46934 HIST3H2BA-201ENST00000436555 524 ntBASIC18.98■□□□□ 0.63
NEDD4P46934 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NEDD4P46934 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.98■□□□□ 0.63
NEDD4P46934 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms