Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 AC009947.1-201ENST00000444350 727 ntBASIC17.34■□□□□ 0.37
SSR1P43307 POU5F1P6-201ENST00000466990 990 ntBASIC17.34■□□□□ 0.37
SSR1P43307 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR1P43307 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR1P43307 AC079776.4-201ENST00000511039 504 ntBASIC17.34■□□□□ 0.37
SSR1P43307 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SSR1P43307 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.34■□□□□ 0.37
SSR1P43307 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR1P43307 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR1P43307 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR1P43307 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.33■□□□□ 0.37
SSR1P43307 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR1P43307 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SSR1P43307 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 HMGA1P7-201ENST00000406908 502 ntBASIC17.33■□□□□ 0.36
SSR1P43307 AC009078.2-202ENST00000463353 338 ntBASIC17.33■□□□□ 0.36
SSR1P43307 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 AL662844.1-201ENST00000546340 181 ntBASIC17.33■□□□□ 0.36
SSR1P43307 AL031055.1-201ENST00000606362 631 ntBASIC17.33■□□□□ 0.36
SSR1P43307 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.33■□□□□ 0.36
SSR1P43307 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.33■□□□□ 0.36
SSR1P43307 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 AP003680.1-201ENST00000598970 3660 ntBASIC17.33■□□□□ 0.36
SSR1P43307 PCDHA3-202ENST00000532566 4594 ntBASIC17.33■□□□□ 0.36
SSR1P43307 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR1P43307 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR1P43307 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.32■□□□□ 0.36
SSR1P43307 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR1P43307 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SSR1P43307 AL031432.2-201ENST00000566714 459 ntBASIC17.32■□□□□ 0.36
SSR1P43307 AL928711.1-201ENST00000570165 459 ntBASIC17.32■□□□□ 0.36
SSR1P43307 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.32■□□□□ 0.36
SSR1P43307 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SSR1P43307 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.32■□□□□ 0.36
SSR1P43307 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.32■□□□□ 0.36
SSR1P43307 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR1P43307 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SSR1P43307 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR1P43307 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSR1P43307 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR1P43307 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSR1P43307 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSR1P43307 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR1P43307 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms