Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KDM5CP41229 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM5CP41229 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KDM5CP41229 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM5CP41229 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KDM5CP41229 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
KDM5CP41229 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 REEP1-202ENST00000453231 940 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 APOA2-204ENST00000464492 530 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM5CP41229 RPSAP36-202ENST00000494591 1261 ntBASIC23.79■■□□□ 1.4
KDM5CP41229 NAT9-224ENST00000583757 583 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM5CP41229 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC23.79■■□□□ 1.4
KDM5CP41229 AC097359.3-201ENST00000603982 1210 ntBASIC23.79■■□□□ 1.4
KDM5CP41229 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
KDM5CP41229 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC23.79■■□□□ 1.4
KDM5CP41229 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
KDM5CP41229 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KDM5CP41229 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.79■■□□□ 1.4
KDM5CP41229 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 TP73-209ENST00000603362 1668 ntTSL 5 BASIC23.79■■□□□ 1.4
KDM5CP41229 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC23.79■■□□□ 1.4
KDM5CP41229 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
KDM5CP41229 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
KDM5CP41229 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
KDM5CP41229 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 AC016629.1-201ENST00000596579 586 ntBASIC23.78■■□□□ 1.4
KDM5CP41229 AC105020.1-201ENST00000435356 2205 ntBASIC23.78■■□□□ 1.4
KDM5CP41229 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC23.78■■□□□ 1.4
KDM5CP41229 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
KDM5CP41229 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC23.78■■□□□ 1.4
KDM5CP41229 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 KRT8P19-201ENST00000551916 1455 ntBASIC23.78■■□□□ 1.4
KDM5CP41229 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KDM5CP41229 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC23.78■■□□□ 1.4
KDM5CP41229 POU5F1P6-201ENST00000466990 990 ntBASIC23.78■■□□□ 1.4
KDM5CP41229 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC23.78■■□□□ 1.4
KDM5CP41229 ACR-203ENST00000529621 708 ntTSL 5 BASIC23.78■■□□□ 1.4
KDM5CP41229 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC23.78■■□□□ 1.4
KDM5CP41229 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC23.78■■□□□ 1.4
KDM5CP41229 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC23.78■■□□□ 1.4
KDM5CP41229 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
KDM5CP41229 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM5CP41229 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
KDM5CP41229 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM5CP41229 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
KDM5CP41229 HLA-A-202ENST00000376806 1854 ntBASIC23.77■■□□□ 1.4
KDM5CP41229 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC23.77■■□□□ 1.4
KDM5CP41229 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM5CP41229 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC23.77■■□□□ 1.4
KDM5CP41229 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC23.77■■□□□ 1.4
KDM5CP41229 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
KDM5CP41229 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 AC023310.1-201ENST00000554836 735 ntBASIC23.77■■□□□ 1.4
KDM5CP41229 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC23.77■■□□□ 1.4
KDM5CP41229 AL096828.3-201ENST00000615354 462 ntBASIC23.77■■□□□ 1.4
KDM5CP41229 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KDM5CP41229 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
KDM5CP41229 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
KDM5CP41229 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
KDM5CP41229 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM5CP41229 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM5CP41229 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM5CP41229 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.76■■□□□ 1.39
KDM5CP41229 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM5CP41229 AC022211.2-201ENST00000585075 2527 ntBASIC23.76■■□□□ 1.39
KDM5CP41229 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KDM5CP41229 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC23.76■■□□□ 1.39
KDM5CP41229 ACKR1-201ENST00000368121 1240 ntBASIC23.76■■□□□ 1.39
KDM5CP41229 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
KDM5CP41229 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC23.76■■□□□ 1.39
KDM5CP41229 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC23.76■■□□□ 1.39
KDM5CP41229 AKR7A2P1-201ENST00000460134 915 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms