Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
USP8P40818 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.75■□□□□ 0.43
USP8P40818 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.75■□□□□ 0.43
USP8P40818 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
USP8P40818 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.75■□□□□ 0.43
USP8P40818 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.75■□□□□ 0.43
USP8P40818 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 AC021097.1-201ENST00000607902 574 ntBASIC17.75■□□□□ 0.43
USP8P40818 BX640515.1-201ENST00000617215 977 ntBASIC17.75■□□□□ 0.43
USP8P40818 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.75■□□□□ 0.43
USP8P40818 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.75■□□□□ 0.43
USP8P40818 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
USP8P40818 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USP8P40818 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.74■□□□□ 0.43
USP8P40818 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP8P40818 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.74■□□□□ 0.43
USP8P40818 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USP8P40818 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 REXO1L8P-201ENST00000604378 1897 ntBASIC17.74■□□□□ 0.43
USP8P40818 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.74■□□□□ 0.43
USP8P40818 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.74■□□□□ 0.43
USP8P40818 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.74■□□□□ 0.43
USP8P40818 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.74■□□□□ 0.43
USP8P40818 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
USP8P40818 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.74■□□□□ 0.43
USP8P40818 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USP8P40818 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.74■□□□□ 0.43
USP8P40818 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.74■□□□□ 0.43
USP8P40818 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
USP8P40818 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.73■□□□□ 0.43
USP8P40818 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.73■□□□□ 0.43
USP8P40818 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.73■□□□□ 0.43
USP8P40818 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USP8P40818 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.73■□□□□ 0.43
USP8P40818 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.73■□□□□ 0.43
USP8P40818 PMS2P4-201ENST00000412466 1052 ntBASIC17.73■□□□□ 0.43
USP8P40818 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.73■□□□□ 0.43
USP8P40818 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.73■□□□□ 0.43
USP8P40818 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.73■□□□□ 0.43
USP8P40818 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.73■□□□□ 0.43
USP8P40818 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.73■□□□□ 0.43
USP8P40818 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USP8P40818 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms