Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGCLP35914 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGCLP35914 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.1■□□□□ 0.17
HMGCLP35914 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 Z92544.3-201ENST00000624747 417 ntBASIC16.1■□□□□ 0.17
HMGCLP35914 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGCLP35914 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HMGCLP35914 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.1■□□□□ 0.17
HMGCLP35914 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HMGCLP35914 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 AC134407.2-201ENST00000625089 1978 ntBASIC16.09■□□□□ 0.17
HMGCLP35914 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 CYP4F24P-201ENST00000586049 1580 ntBASIC16.09■□□□□ 0.17
HMGCLP35914 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 AL365203.3-201ENST00000609742 2057 ntBASIC16.09■□□□□ 0.17
HMGCLP35914 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 METTL21AP1-201ENST00000438852 635 ntBASIC16.09■□□□□ 0.17
HMGCLP35914 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.09■□□□□ 0.17
HMGCLP35914 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 RN7SL828P-201ENST00000607615 303 ntBASIC16.09■□□□□ 0.17
HMGCLP35914 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HMGCLP35914 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HMGCLP35914 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
HMGCLP35914 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HMGCLP35914 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HMGCLP35914 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HMGCLP35914 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HMGCLP35914 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.08■□□□□ 0.17
HMGCLP35914 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.08■□□□□ 0.17
HMGCLP35914 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
HMGCLP35914 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
HMGCLP35914 CROCCP1-201ENST00000426910 5675 ntBASIC16.08■□□□□ 0.17
HMGCLP35914 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGCLP35914 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HMGCLP35914 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGCLP35914 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.08■□□□□ 0.16
HMGCLP35914 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 AC092183.1-201ENST00000469884 875 ntBASIC16.08■□□□□ 0.16
HMGCLP35914 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.08■□□□□ 0.16
HMGCLP35914 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.08■□□□□ 0.16
HMGCLP35914 AL133215.2-201ENST00000609242 977 ntBASIC16.08■□□□□ 0.16
HMGCLP35914 AC093028.1-201ENST00000622998 982 ntBASIC16.08■□□□□ 0.16
HMGCLP35914 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 TUBB3P1-201ENST00000405796 1332 ntBASIC16.08■□□□□ 0.16
HMGCLP35914 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.08■□□□□ 0.16
HMGCLP35914 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HMGCLP35914 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms