Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHA3P29320 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHA3P29320 TMBIM7P-203ENST00000641617 1718 ntBASIC15.82■□□□□ 0.12
EPHA3P29320 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 AC138035.3-201ENST00000622706 2791 ntBASIC15.81■□□□□ 0.12
EPHA3P29320 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 AC073621.1-201ENST00000392730 636 ntBASIC15.81■□□□□ 0.12
EPHA3P29320 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
EPHA3P29320 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.81■□□□□ 0.12
EPHA3P29320 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 REXO1L6P-202ENST00000619970 1078 ntBASIC15.81■□□□□ 0.12
EPHA3P29320 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
EPHA3P29320 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.81■□□□□ 0.12
EPHA3P29320 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
EPHA3P29320 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.8■□□□□ 0.12
EPHA3P29320 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.8■□□□□ 0.12
EPHA3P29320 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.8■□□□□ 0.12
EPHA3P29320 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.8■□□□□ 0.12
EPHA3P29320 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.8■□□□□ 0.12
EPHA3P29320 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
EPHA3P29320 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EPHA3P29320 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.8■□□□□ 0.12
EPHA3P29320 AC067930.6-201ENST00000623257 4947 ntBASIC15.8■□□□□ 0.12
EPHA3P29320 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms