Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 AL645939.2-201ENST00000427340 991 ntBASIC14.94□□□□□ -0.02
ABCD3P28288 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 FAM86GP-201ENST00000448322 971 ntBASIC14.94□□□□□ -0.02
ABCD3P28288 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.94□□□□□ -0.02
ABCD3P28288 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCD3P28288 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.94□□□□□ -0.02
ABCD3P28288 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCD3P28288 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.94□□□□□ -0.02
ABCD3P28288 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ABCD3P28288 FER1L4-210ENST00000615531 5998 ntBASIC14.94□□□□□ -0.02
ABCD3P28288 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCD3P28288 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 TUBB3P1-201ENST00000405796 1332 ntBASIC14.93□□□□□ -0.02
ABCD3P28288 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ABCD3P28288 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 AC067863.1-201ENST00000494933 530 ntBASIC14.93□□□□□ -0.02
ABCD3P28288 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.93□□□□□ -0.02
ABCD3P28288 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.93□□□□□ -0.02
ABCD3P28288 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.93□□□□□ -0.02
ABCD3P28288 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.93□□□□□ -0.02
ABCD3P28288 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.93□□□□□ -0.02
ABCD3P28288 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ABCD3P28288 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.92□□□□□ -0.02
ABCD3P28288 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ABCD3P28288 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.92□□□□□ -0.02
ABCD3P28288 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ABCD3P28288 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.92□□□□□ -0.02
ABCD3P28288 KLF2P3-201ENST00000451977 1087 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms