Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.46■□□□□ 0.71
LMNB1P20700 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
LMNB1P20700 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LMNB1P20700 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LMNB1P20700 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
LMNB1P20700 TOMM22P5-201ENST00000416399 439 ntBASIC19.45■□□□□ 0.7
LMNB1P20700 AC074338.1-201ENST00000416825 156 ntBASIC19.45■□□□□ 0.7
LMNB1P20700 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 AC253536.4-201ENST00000440539 267 ntBASIC19.45■□□□□ 0.7
LMNB1P20700 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.45■□□□□ 0.7
LMNB1P20700 VDAC1P7-201ENST00000462417 847 ntBASIC19.45■□□□□ 0.7
LMNB1P20700 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.45■□□□□ 0.7
LMNB1P20700 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 PCDHB17P-201ENST00000539533 2393 ntBASIC19.45■□□□□ 0.7
LMNB1P20700 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.45■□□□□ 0.7
LMNB1P20700 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LMNB1P20700 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
LMNB1P20700 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.44■□□□□ 0.7
LMNB1P20700 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
LMNB1P20700 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LMNB1P20700 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 AL031731.1-201ENST00000642131 2094 ntBASIC19.44■□□□□ 0.7
LMNB1P20700 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LMNB1P20700 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LMNB1P20700 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 AZGP1P1-201ENST00000411909 902 ntBASIC19.44■□□□□ 0.7
LMNB1P20700 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.44■□□□□ 0.7
LMNB1P20700 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.44■□□□□ 0.7
LMNB1P20700 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.44■□□□□ 0.7
LMNB1P20700 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.44■□□□□ 0.7
LMNB1P20700 AC020914.3-201ENST00000594712 304 ntBASIC19.44■□□□□ 0.7
LMNB1P20700 AC005695.3-201ENST00000614522 232 ntBASIC19.44■□□□□ 0.7
LMNB1P20700 AC092053.1-201ENST00000605787 1936 ntBASIC19.44■□□□□ 0.7
LMNB1P20700 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.44■□□□□ 0.7
LMNB1P20700 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LMNB1P20700 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LMNB1P20700 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 KRT8P37-201ENST00000451609 1420 ntBASIC19.43■□□□□ 0.7
LMNB1P20700 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LMNB1P20700 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 AP006547.1-201ENST00000563435 692 ntBASIC19.43■□□□□ 0.7
LMNB1P20700 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.43■□□□□ 0.7
LMNB1P20700 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.43■□□□□ 0.7
LMNB1P20700 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LMNB1P20700 U62317.3-201ENST00000608319 855 ntBASIC19.43■□□□□ 0.7
LMNB1P20700 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms