Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC2P18074 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC2P18074 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC2P18074 RPS8P6-201ENST00000426177 609 ntBASIC16.67■□□□□ 0.26
ERCC2P18074 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC2P18074 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC2P18074 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.67■□□□□ 0.26
ERCC2P18074 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 AL691403.2-201ENST00000618460 490 ntBASIC16.67■□□□□ 0.26
ERCC2P18074 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ERCC2P18074 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC2P18074 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC2P18074 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC2P18074 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC2P18074 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC2P18074 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.66■□□□□ 0.26
ERCC2P18074 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC2P18074 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC2P18074 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ERCC2P18074 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC2P18074 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ERCC2P18074 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC2P18074 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ERCC2P18074 AC027612.4-201ENST00000605371 583 ntBASIC16.66■□□□□ 0.26
ERCC2P18074 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.66■□□□□ 0.26
ERCC2P18074 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ERCC2P18074 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC2P18074 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC2P18074 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC2P18074 AC022188.1-201ENST00000620960 1664 ntBASIC16.65■□□□□ 0.26
ERCC2P18074 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 SPDYE14P-201ENST00000442619 822 ntBASIC16.65■□□□□ 0.26
ERCC2P18074 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.65■□□□□ 0.26
ERCC2P18074 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC2P18074 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ERCC2P18074 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC2P18074 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC2P18074 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC2P18074 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ERCC2P18074 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms