Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN1P18031 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 AC004890.2-204ENST00000481968 304 ntBASIC17.11■□□□□ 0.33
PTPN1P18031 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN1P18031 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 AL596087.1-201ENST00000400979 1969 ntBASIC17.11■□□□□ 0.33
PTPN1P18031 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
PTPN1P18031 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN1P18031 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN1P18031 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.11■□□□□ 0.33
PTPN1P18031 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN1P18031 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN1P18031 MTHFR-217ENST00000641820 1569 ntBASIC17.11■□□□□ 0.33
PTPN1P18031 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PTPN1P18031 AC004987.2-201ENST00000395959 1148 ntBASIC17.1■□□□□ 0.33
PTPN1P18031 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 HAUS4P1-201ENST00000406739 1145 ntBASIC17.1■□□□□ 0.33
PTPN1P18031 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PTPN1P18031 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.1■□□□□ 0.33
PTPN1P18031 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN1P18031 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.1■□□□□ 0.33
PTPN1P18031 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.1■□□□□ 0.33
PTPN1P18031 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 AC243562.2-201ENST00000561247 970 ntBASIC17.1■□□□□ 0.33
PTPN1P18031 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 AC087499.5-201ENST00000452760 1342 ntBASIC17.1■□□□□ 0.33
PTPN1P18031 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.1■□□□□ 0.33
PTPN1P18031 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTPN1P18031 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTPN1P18031 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms