Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PDGFRAP16234 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFRAP16234 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
PDGFRAP16234 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFRAP16234 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.02■□□□□ 0.32
PDGFRAP16234 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFRAP16234 AL627223.1-201ENST00000416693 442 ntBASIC17.02■□□□□ 0.32
PDGFRAP16234 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFRAP16234 AC069335.1-201ENST00000489972 472 ntBASIC17.02■□□□□ 0.32
PDGFRAP16234 AC093520.2-201ENST00000561830 333 ntBASIC17.02■□□□□ 0.32
PDGFRAP16234 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.02■□□□□ 0.32
PDGFRAP16234 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PDGFRAP16234 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDGFRAP16234 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.02■□□□□ 0.32
PDGFRAP16234 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.02■□□□□ 0.32
PDGFRAP16234 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.02■□□□□ 0.31
PDGFRAP16234 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFRAP16234 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFRAP16234 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.02■□□□□ 0.31
PDGFRAP16234 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFRAP16234 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFRAP16234 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFRAP16234 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFRAP16234 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.02■□□□□ 0.31
PDGFRAP16234 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFRAP16234 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
PDGFRAP16234 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDGFRAP16234 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.02■□□□□ 0.31
PDGFRAP16234 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 AL365203.3-201ENST00000609742 2057 ntBASIC17.01■□□□□ 0.31
PDGFRAP16234 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.01■□□□□ 0.31
PDGFRAP16234 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.01■□□□□ 0.31
PDGFRAP16234 AC023141.5-201ENST00000458585 616 ntBASIC17.01■□□□□ 0.31
PDGFRAP16234 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.01■□□□□ 0.31
PDGFRAP16234 LINC02447-202ENST00000501888 2146 ntBASIC17.01■□□□□ 0.31
PDGFRAP16234 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.01■□□□□ 0.31
PDGFRAP16234 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.01■□□□□ 0.31
PDGFRAP16234 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
PDGFRAP16234 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDGFRAP16234 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 CDC14C-201ENST00000428251 1719 ntBASIC17.01■□□□□ 0.31
PDGFRAP16234 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
PDGFRAP16234 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDGFRAP16234 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.01■□□□□ 0.31
PDGFRAP16234 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17■□□□□ 0.31
PDGFRAP16234 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17■□□□□ 0.31
PDGFRAP16234 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17■□□□□ 0.31
PDGFRAP16234 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17■□□□□ 0.31
PDGFRAP16234 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
PDGFRAP16234 TSEN15P1-201ENST00000423257 515 ntBASIC17■□□□□ 0.31
PDGFRAP16234 PMS2P2-201ENST00000425039 1128 ntBASIC17■□□□□ 0.31
PDGFRAP16234 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17■□□□□ 0.31
PDGFRAP16234 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 AC245100.5-201ENST00000452108 331 ntBASIC17■□□□□ 0.31
PDGFRAP16234 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 SLC25A39P2-201ENST00000537614 270 ntBASIC17■□□□□ 0.31
PDGFRAP16234 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDGFRAP16234 AC024267.1-201ENST00000582320 895 ntBASIC17■□□□□ 0.31
PDGFRAP16234 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17■□□□□ 0.31
PDGFRAP16234 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDGFRAP16234 AC084121.4-201ENST00000641598 221 ntBASIC17■□□□□ 0.31
PDGFRAP16234 AF228730.8-201ENST00000642140 221 ntBASIC17■□□□□ 0.31
PDGFRAP16234 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms