Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
UBL4AP11441 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.07■□□□□ 0
UBL4AP11441 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
UBL4AP11441 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBL4AP11441 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 AC105917.1-201ENST00000506637 2539 ntBASIC15.06■□□□□ 0
UBL4AP11441 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 DBET-201ENST00000630918 3363 ntBASIC15.06■□□□□ 0
UBL4AP11441 U82695.1-201ENST00000635752 1889 ntBASIC15.06■□□□□ 0
UBL4AP11441 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 FAM58CP-201ENST00000435741 640 ntBASIC15.06■□□□□ 0
UBL4AP11441 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.06■□□□□ 0
UBL4AP11441 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 PGAM5P1-201ENST00000518923 814 ntBASIC15.06■□□□□ 0
UBL4AP11441 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.06■□□□□ 0
UBL4AP11441 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 AC099522.2-201ENST00000607001 744 ntBASIC15.06■□□□□ 0
UBL4AP11441 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 PMS2P7-201ENST00000506558 1336 ntBASIC15.06■□□□□ 0
UBL4AP11441 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.06■□□□□ 0
UBL4AP11441 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
UBL4AP11441 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.06■□□□□ 0
UBL4AP11441 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.06■□□□□ 0
UBL4AP11441 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
UBL4AP11441 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBL4AP11441 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.06■□□□□ 0
UBL4AP11441 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBL4AP11441 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.06■□□□□ 0
UBL4AP11441 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.05■□□□□ 0
UBL4AP11441 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.05■□□□□ 0
UBL4AP11441 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 AL137784.3-201ENST00000623858 2288 ntBASIC15.05■□□□□ 0
UBL4AP11441 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.05■□□□□ 0
UBL4AP11441 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.05■□□□□ 0
UBL4AP11441 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.05■□□□□ 0
UBL4AP11441 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UBL4AP11441 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.05■□□□□ 0
UBL4AP11441 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBL4AP11441 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.05■□□□□ -0
UBL4AP11441 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 RARRES2P8-201ENST00000566335 367 ntBASIC15.05■□□□□ -0
UBL4AP11441 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.05■□□□□ -0
UBL4AP11441 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 AL513523.2-202ENST00000427283 2040 ntBASIC15.05■□□□□ -0
UBL4AP11441 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.05■□□□□ -0
UBL4AP11441 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBL4AP11441 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UBL4AP11441 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
UBL4AP11441 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.05■□□□□ -0
UBL4AP11441 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBL4AP11441 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms