Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 BCYRN1-201ENST00000418539 200 ntBASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 BRI3BPP1-201ENST00000594224 787 ntBASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.29■■□□□ 1
CSB-PGBD3P0DP91 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AC074338.1-201ENST00000416825 156 ntBASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 RNA5SP412-201ENST00000516234 123 ntBASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AC068587.3-201ENST00000526613 355 ntBASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AC243562.2-201ENST00000561247 970 ntBASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CSB-PGBD3P0DP91 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AC134915.1-201ENST00000426461 574 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 RPL7P3-201ENST00000441388 714 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 TARDBPP1-201ENST00000442013 1203 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AL355864.2-201ENST00000447420 863 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 FO681548.1-201ENST00000455617 1132 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 CD74-212ENST00000524315 584 ntTSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AP001889.1-201ENST00000525414 633 ntBASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSB-PGBD3P0DP91 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.27■□□□□ 0.99
CSB-PGBD3P0DP91 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 AC020907.1-201ENST00000616460 1350 ntBASIC21.26■□□□□ 0.99
CSB-PGBD3P0DP91 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms