Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.11■□□□□ 0.49
CYP3A4P08684 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CYP3A4P08684 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 AC124067.4-201ENST00000519691 2379 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 LINC02447-202ENST00000501888 2146 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 AC112504.1-201ENST00000623415 1841 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.1■□□□□ 0.49
CYP3A4P08684 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.1■□□□□ 0.49
CYP3A4P08684 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.1■□□□□ 0.49
CYP3A4P08684 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.1■□□□□ 0.49
CYP3A4P08684 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CYP3A4P08684 LINC02560-201ENST00000596379 459 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 AL450472.2-201ENST00000603663 1156 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 AC009118.2-201ENST00000613275 655 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 AC008761.3-201ENST00000624803 892 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 AL109936.8-201ENST00000641772 604 ntBASIC18.1■□□□□ 0.49
CYP3A4P08684 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
CYP3A4P08684 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CYP3A4P08684 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CYP3A4P08684 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CYP3A4P08684 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CYP3A4P08684 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CYP3A4P08684 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.09■□□□□ 0.49
CYP3A4P08684 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CYP3A4P08684 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC236430.1-201ENST00000402231 743 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 AC136604.1-201ENST00000418535 575 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 SPTLC1P1-201ENST00000447199 261 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 SERBP1P5-201ENST00000510079 1181 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC135586.1-201ENST00000539323 574 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.09■□□□□ 0.49
CYP3A4P08684 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CYP3A4P08684 AC097359.3-201ENST00000603982 1210 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 AC074044.1-201ENST00000609673 707 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.09■□□□□ 0.49
CYP3A4P08684 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
CYP3A4P08684 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CYP3A4P08684 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CYP3A4P08684 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.08■□□□□ 0.49
CYP3A4P08684 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CYP3A4P08684 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CYP3A4P08684 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CYP3A4P08684 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CYP3A4P08684 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CYP3A4P08684 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.08■□□□□ 0.48
CYP3A4P08684 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CYP3A4P08684 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.08■□□□□ 0.48
CYP3A4P08684 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
CYP3A4P08684 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms