Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 AC138035.3-201ENST00000622706 2791 ntBASIC12.39□□□□□ -0.43
TCRAP04437 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRAP04437 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 AC132008.2-207ENST00000454517 770 ntBASIC12.39□□□□□ -0.43
TCRAP04437 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 AL160237.2-201ENST00000556165 472 ntBASIC12.39□□□□□ -0.43
TCRAP04437 RN7SL850P-201ENST00000579959 291 ntBASIC12.39□□□□□ -0.43
TCRAP04437 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.39□□□□□ -0.43
TCRAP04437 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.39□□□□□ -0.43
TCRAP04437 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.39□□□□□ -0.43
TCRAP04437 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TCRAP04437 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 OR2I1P-210ENST00000642037 4691 ntBASIC12.38□□□□□ -0.43
TCRAP04437 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRAP04437 CICP13-201ENST00000422015 2789 ntBASIC12.38□□□□□ -0.43
TCRAP04437 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 RBM17P3-201ENST00000417687 1192 ntBASIC12.38□□□□□ -0.43
TCRAP04437 KRT16P4-201ENST00000453883 522 ntBASIC12.38□□□□□ -0.43
TCRAP04437 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.38□□□□□ -0.43
TCRAP04437 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.38□□□□□ -0.43
TCRAP04437 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 AC066615.1-201ENST00000640911 628 ntBASIC12.38□□□□□ -0.43
TCRAP04437 AL805961.1-202ENST00000641562 540 ntBASIC12.38□□□□□ -0.43
TCRAP04437 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 OR2I1P-209ENST00000641730 5365 ntBASIC12.38□□□□□ -0.43
TCRAP04437 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.38□□□□□ -0.43
TCRAP04437 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.38□□□□□ -0.43
TCRAP04437 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TCRAP04437 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 AC129492.6-201ENST00000611383 1305 ntBASIC12.37□□□□□ -0.43
TCRAP04437 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.37□□□□□ -0.43
TCRAP04437 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TCRAP04437 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TCRAP04437 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms