Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRNA1P02708 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA1P02708 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNA1P02708 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNA1P02708 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA1P02708 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA1P02708 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 KRT18P64-201ENST00000434946 1219 ntBASIC17.47■□□□□ 0.39
CHRNA1P02708 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA1P02708 USP32P1-208ENST00000506594 1164 ntBASIC17.47■□□□□ 0.39
CHRNA1P02708 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA1P02708 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNA1P02708 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.47■□□□□ 0.39
CHRNA1P02708 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRNA1P02708 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA1P02708 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA1P02708 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA1P02708 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHRNA1P02708 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA1P02708 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA1P02708 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.46■□□□□ 0.39
CHRNA1P02708 AC234783.1-201ENST00000441761 496 ntBASIC17.46■□□□□ 0.39
CHRNA1P02708 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA1P02708 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA1P02708 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNA1P02708 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CHRNA1P02708 BTNL10-201ENST00000595971 695 ntBASIC17.46■□□□□ 0.39
CHRNA1P02708 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.46■□□□□ 0.39
CHRNA1P02708 COX11-210ENST00000639671 696 ntBASIC17.46■□□□□ 0.39
CHRNA1P02708 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CHRNA1P02708 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA1P02708 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA1P02708 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA1P02708 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.38
CHRNA1P02708 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA1P02708 AC080080.1-201ENST00000625121 2420 ntBASIC17.46■□□□□ 0.38
CHRNA1P02708 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
CHRNA1P02708 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA1P02708 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CHRNA1P02708 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
CHRNA1P02708 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA1P02708 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHRNA1P02708 FLJ38576-201ENST00000623820 2459 ntBASIC17.45■□□□□ 0.38
CHRNA1P02708 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA1P02708 ANKRD19P-201ENST00000338192 862 ntBASIC17.45■□□□□ 0.38
CHRNA1P02708 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA1P02708 AL442647.2-201ENST00000429864 857 ntBASIC17.45■□□□□ 0.38
CHRNA1P02708 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms