Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.88□□□□□ -0.35
IFNA1P01562 PGM5P2-202ENST00000637225 1043 ntBASIC12.88□□□□□ -0.35
IFNA1P01562 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.88□□□□□ -0.35
IFNA1P01562 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
IFNA1P01562 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
IFNA1P01562 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.88□□□□□ -0.35
IFNA1P01562 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 GPAA1P2-202ENST00000606848 1787 ntBASIC12.87□□□□□ -0.35
IFNA1P01562 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 MROH4P-201ENST00000431302 1578 ntBASIC12.87□□□□□ -0.35
IFNA1P01562 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 HBZP1-201ENST00000354915 429 ntBASIC12.87□□□□□ -0.35
IFNA1P01562 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.87□□□□□ -0.35
IFNA1P01562 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.87□□□□□ -0.35
IFNA1P01562 RASA4DP-201ENST00000460726 1199 ntBASIC12.87□□□□□ -0.35
IFNA1P01562 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.87□□□□□ -0.35
IFNA1P01562 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.87□□□□□ -0.35
IFNA1P01562 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.87□□□□□ -0.35
IFNA1P01562 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.87□□□□□ -0.35
IFNA1P01562 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
IFNA1P01562 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
IFNA1P01562 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
IFNA1P01562 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 AC013726.1-201ENST00000563747 2285 ntBASIC12.87□□□□□ -0.35
IFNA1P01562 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
IFNA1P01562 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
IFNA1P01562 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
IFNA1P01562 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.86□□□□□ -0.35
IFNA1P01562 AL390755.1-201ENST00000623716 2027 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
IFNA1P01562 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 AC007191.1-201ENST00000623179 2995 ntBASIC12.86□□□□□ -0.35
IFNA1P01562 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
IFNA1P01562 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms