Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PDGFBP01127 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.08■□□□□ 0.16
PDGFBP01127 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.08■□□□□ 0.16
PDGFBP01127 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.08■□□□□ 0.16
PDGFBP01127 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.08■□□□□ 0.16
PDGFBP01127 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.08■□□□□ 0.16
PDGFBP01127 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.08■□□□□ 0.16
PDGFBP01127 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.08■□□□□ 0.16
PDGFBP01127 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.08■□□□□ 0.16
PDGFBP01127 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 AC005622.1-201ENST00000636801 1703 ntBASIC16.08■□□□□ 0.16
PDGFBP01127 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PDGFBP01127 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFBP01127 AL645728.1-201ENST00000366221 2101 ntBASIC16.07■□□□□ 0.16
PDGFBP01127 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFBP01127 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFBP01127 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PDGFBP01127 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.07■□□□□ 0.16
PDGFBP01127 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.07■□□□□ 0.16
PDGFBP01127 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 MIR1202-201ENST00000408529 83 ntBASIC16.07■□□□□ 0.16
PDGFBP01127 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 NDUFV2P1-201ENST00000596415 907 ntBASIC16.07■□□□□ 0.16
PDGFBP01127 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.07■□□□□ 0.16
PDGFBP01127 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDGFBP01127 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
PDGFBP01127 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PDGFBP01127 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFBP01127 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDGFBP01127 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFBP01127 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDGFBP01127 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFBP01127 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 AL691432.1-201ENST00000596308 1422 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFBP01127 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDGFBP01127 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 CYP46A4P-201ENST00000414953 267 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PDGFBP01127 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 AL590640.2-201ENST00000457038 527 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 AC245884.6-201ENST00000515672 1067 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.06■□□□□ 0.16
PDGFBP01127 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFBP01127 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFBP01127 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.06■□□□□ 0.16
PDGFBP01127 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.06■□□□□ 0.16
PDGFBP01127 AC091812.3-201ENST00000621362 345 ntBASIC16.06■□□□□ 0.16
PDGFBP01127 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFBP01127 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFBP01127 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms