Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-CO1P00395 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.64■□□□□ 0.25
MT-CO1P00395 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-CO1P00395 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 AC005498.2-205ENST00000593218 784 ntBASIC16.64■□□□□ 0.25
MT-CO1P00395 AC003101.2-201ENST00000612557 442 ntBASIC16.64■□□□□ 0.25
MT-CO1P00395 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MT-CO1P00395 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.64■□□□□ 0.25
MT-CO1P00395 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.64■□□□□ 0.25
MT-CO1P00395 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
MT-CO1P00395 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MT-CO1P00395 MIR770-201ENST00000390219 98 ntBASIC16.63■□□□□ 0.25
MT-CO1P00395 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AC125807.1-201ENST00000483097 614 ntBASIC16.63■□□□□ 0.25
MT-CO1P00395 AC067863.1-201ENST00000494933 530 ntBASIC16.63■□□□□ 0.25
MT-CO1P00395 RNA5SP410-201ENST00000516285 106 ntBASIC16.63■□□□□ 0.25
MT-CO1P00395 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.63■□□□□ 0.25
MT-CO1P00395 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MT-CO1P00395 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MT-CO1P00395 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MT-CO1P00395 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.63■□□□□ 0.25
MT-CO1P00395 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-CO1P00395 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MT-CO1P00395 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-CO1P00395 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MT-CO1P00395 AC107890.1-201ENST00000422478 521 ntBASIC16.62■□□□□ 0.25
MT-CO1P00395 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.62■□□□□ 0.25
MT-CO1P00395 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.62■□□□□ 0.25
MT-CO1P00395 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
MT-CO1P00395 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.62■□□□□ 0.25
MT-CO1P00395 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MT-CO1P00395 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms