Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.45□□□□□ -0.1
CNOT4O95628 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 SPDYE14P-201ENST00000442619 822 ntBASIC14.45□□□□□ -0.1
CNOT4O95628 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.45□□□□□ -0.1
CNOT4O95628 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.45□□□□□ -0.1
CNOT4O95628 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.45□□□□□ -0.1
CNOT4O95628 RARRES2P9-201ENST00000565168 469 ntBASIC14.45□□□□□ -0.1
CNOT4O95628 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.45□□□□□ -0.1
CNOT4O95628 AJ011932.1-201ENST00000621707 465 ntBASIC14.45□□□□□ -0.1
CNOT4O95628 U82695.1-201ENST00000635752 1889 ntBASIC14.45□□□□□ -0.1
CNOT4O95628 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.45□□□□□ -0.1
CNOT4O95628 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CNOT4O95628 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CNOT4O95628 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.45□□□□□ -0.1
CNOT4O95628 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CNOT4O95628 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.44□□□□□ -0.1
CNOT4O95628 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CNOT4O95628 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CNOT4O95628 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.44□□□□□ -0.1
CNOT4O95628 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.44□□□□□ -0.1
CNOT4O95628 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 AC093214.1-201ENST00000511688 1107 ntBASIC14.44□□□□□ -0.1
CNOT4O95628 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
CNOT4O95628 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.44□□□□□ -0.1
CNOT4O95628 AL365330.1-201ENST00000607459 531 ntBASIC14.44□□□□□ -0.1
CNOT4O95628 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.44□□□□□ -0.1
CNOT4O95628 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CNOT4O95628 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CNOT4O95628 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CNOT4O95628 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 AC106886.4-201ENST00000623557 2502 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 FOXO1B-201ENST00000504678 1527 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 AL589702.1-201ENST00000641229 1509 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 AC067930.6-201ENST00000623257 4947 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms