Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HIST3H2BA-201ENST00000436555 524 ntBASIC19.26■□□□□ 0.67
MBD4O95243 SERBP1P3-201ENST00000459980 809 ntBASIC19.26■□□□□ 0.67
MBD4O95243 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.26■□□□□ 0.67
MBD4O95243 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
MBD4O95243 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.26■□□□□ 0.67
MBD4O95243 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.26■□□□□ 0.67
MBD4O95243 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MBD4O95243 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.26■□□□□ 0.67
MBD4O95243 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MBD4O95243 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MBD4O95243 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MBD4O95243 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD4O95243 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD4O95243 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD4O95243 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD4O95243 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD4O95243 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MBD4O95243 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 AC002472.2-201ENST00000442739 958 ntBASIC19.25■□□□□ 0.67
MBD4O95243 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 AC044860.1-202ENST00000559481 777 ntBASIC19.25■□□□□ 0.67
MBD4O95243 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.25■□□□□ 0.67
MBD4O95243 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.25■□□□□ 0.67
MBD4O95243 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD4O95243 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD4O95243 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD4O95243 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MBD4O95243 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
MBD4O95243 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.24■□□□□ 0.67
MBD4O95243 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.24■□□□□ 0.67
MBD4O95243 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.24■□□□□ 0.67
MBD4O95243 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 SERBP1P5-201ENST00000510079 1181 ntBASIC19.24■□□□□ 0.67
MBD4O95243 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MBD4O95243 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.24■□□□□ 0.67
MBD4O95243 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.24■□□□□ 0.67
MBD4O95243 LINC02084-201ENST00000606069 1096 ntBASIC19.24■□□□□ 0.67
MBD4O95243 AC004840.1-201ENST00000636359 365 ntBASIC19.24■□□□□ 0.67
MBD4O95243 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD4O95243 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
MBD4O95243 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD4O95243 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD4O95243 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MBD4O95243 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD4O95243 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
MBD4O95243 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD4O95243 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
MBD4O95243 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD4O95243 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD4O95243 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms