Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 EHF-205ENST00000527935 557 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.06■□□□□ 0.96
LTN1O94822 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
LTN1O94822 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LTN1O94822 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
LTN1O94822 MIR648-201ENST00000385046 94 ntBASIC21.05■□□□□ 0.96
LTN1O94822 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.05■□□□□ 0.96
LTN1O94822 FAM86HP-204ENST00000513466 959 ntBASIC21.05■□□□□ 0.96
LTN1O94822 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.05■□□□□ 0.96
LTN1O94822 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.05■□□□□ 0.96
LTN1O94822 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.05■□□□□ 0.96
LTN1O94822 AP001063.1-201ENST00000568332 529 ntBASIC21.05■□□□□ 0.96
LTN1O94822 AC093813.1-201ENST00000605066 256 ntBASIC21.05■□□□□ 0.96
LTN1O94822 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.05■□□□□ 0.96
LTN1O94822 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.05■□□□□ 0.96
LTN1O94822 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 MTHFR-217ENST00000641820 1569 ntBASIC21.05■□□□□ 0.96
LTN1O94822 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.05■□□□□ 0.96
LTN1O94822 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.05■□□□□ 0.96
LTN1O94822 AC092933.1-201ENST00000393644 945 ntBASIC21.05■□□□□ 0.96
LTN1O94822 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.05■□□□□ 0.96
LTN1O94822 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.05■□□□□ 0.96
LTN1O94822 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.05■□□□□ 0.96
LTN1O94822 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC21.05■□□□□ 0.96
LTN1O94822 AC010328.2-201ENST00000597698 1111 ntBASIC21.05■□□□□ 0.96
LTN1O94822 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.05■□□□□ 0.96
LTN1O94822 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LTN1O94822 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.05■□□□□ 0.96
LTN1O94822 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LTN1O94822 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.04■□□□□ 0.96
LTN1O94822 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 RPL13AP20-201ENST00000459725 609 ntBASIC21.04■□□□□ 0.96
LTN1O94822 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC21.04■□□□□ 0.96
LTN1O94822 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.04■□□□□ 0.96
LTN1O94822 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.04■□□□□ 0.96
LTN1O94822 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LTN1O94822 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.03■□□□□ 0.96
LTN1O94822 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC21.03■□□□□ 0.96
LTN1O94822 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LTN1O94822 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LTN1O94822 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.03■□□□□ 0.96
LTN1O94822 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 AC022211.2-201ENST00000585075 2527 ntBASIC21.03■□□□□ 0.96
LTN1O94822 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.03■□□□□ 0.96
LTN1O94822 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.03■□□□□ 0.96
LTN1O94822 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LTN1O94822 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LTN1O94822 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LTN1O94822 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.03■□□□□ 0.96
LTN1O94822 AC018892.3-201ENST00000623986 2499 ntBASIC21.03■□□□□ 0.96
LTN1O94822 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms