Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.72□□□□□ -0.21
PDCD6O75340 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PDCD6O75340 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PDCD6O75340 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.72□□□□□ -0.21
PDCD6O75340 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PDCD6O75340 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PDCD6O75340 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.72□□□□□ -0.21
PDCD6O75340 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 AP003680.1-201ENST00000598970 3660 ntBASIC13.71□□□□□ -0.21
PDCD6O75340 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.71□□□□□ -0.21
PDCD6O75340 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 IGLL3P-201ENST00000412472 434 ntBASIC13.71□□□□□ -0.21
PDCD6O75340 AC098831.1-202ENST00000438821 336 ntBASIC13.71□□□□□ -0.21
PDCD6O75340 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.71□□□□□ -0.21
PDCD6O75340 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.71□□□□□ -0.21
PDCD6O75340 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.71□□□□□ -0.21
PDCD6O75340 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.71□□□□□ -0.21
PDCD6O75340 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 AL078644.1-201ENST00000609881 752 ntBASIC13.71□□□□□ -0.21
PDCD6O75340 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PDCD6O75340 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.71□□□□□ -0.21
PDCD6O75340 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PDCD6O75340 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.71□□□□□ -0.22
PDCD6O75340 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.71□□□□□ -0.22
PDCD6O75340 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PDCD6O75340 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.71□□□□□ -0.22
PDCD6O75340 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.71□□□□□ -0.22
PDCD6O75340 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PDCD6O75340 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.7□□□□□ -0.22
PDCD6O75340 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PDCD6O75340 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.7□□□□□ -0.22
PDCD6O75340 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PDCD6O75340 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.7□□□□□ -0.22
PDCD6O75340 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.7□□□□□ -0.22
PDCD6O75340 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.7□□□□□ -0.22
PDCD6O75340 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.7□□□□□ -0.22
PDCD6O75340 MIR7706-201ENST00000613747 67 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms